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Differences between protein fitness models can be used to design variants of altered specificity
Sam Berry, Rachelle Gaudet, Debora S Marks
Unified sampling framework and experimental benchmarking of sequence- and structure-based protein models
Aviv Spinner, Pascal Notin, Sam Berry, Dana Cortade, Zach Sisson, Svetlana Ikonomova, David Ross, Debora Marks
Determinants of metal import and specificity in a bacterial transporter
Sam Berry, Camille B Freedman, Debora S Marks, Rachelle Gaudet
Structural and functional basis of proton-independent transition metal import by a canonical bacterial Nramp transporter
Shamayeeta Ray, Sam Berry, Rachelle Gaudet